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1

Monitoring GFP-operon fusion protein expression during high cell density cultivation of Escherichia coli using an on-line optical sensor

Matthew P. DeLisa, Jincai Li, Govind Rao, William A. Weigand, William E. Bentley

Journal:

Biotechnology and Bioengineering

Year:

1999

Language:

english

File:

PDF, 321 KB

english, 1999

2

Framework for online optimization of recombinant protein expression in high-cell-density Escherichia coli cultures using GFP-fusion monitoring

Hee Jeong Chae, Matthew P. Delisa, Hyung Joon Cha, William A. Weigand, Govind Rao, William E. Bentley

Journal:

Biotechnology and Bioengineering

Year:

2000

Language:

english

File:

PDF, 187 KB

english, 2000

3

Expanding the glycoengineering toolbox: the rise of bacterial N-linked protein glycosylation

Baker, Jenny L., Çelik, Eda, DeLisa, Matthew P.

Journal:

Trends in Biotechnology

Year:

2013

Language:

english

File:

PDF, 723 KB

english, 2013

4

Evanescent Wave Long-Period Fiber Bragg Grating as an Immobilized Antibody Biosensor

DeLisa, Matthew P., Zhang, Zheng, Shiloach, Mira, Pilevar, Saeed, Davis, Christopher C., Sirkis, James S., Bentley, William E.

Journal:

Analytical Chemistry

Year:

2000

Language:

english

File:

PDF, 163 KB

english, 2000

5

Golgi-on-a-Chip for the Cell-Free Bio-Nanomanufacturing of Protein Therapeutics

Daniel, Susan, Aquino, Alicia, DeLisa, Matthew, Jaroentomeechai, Thapakorn, Liu, Han-Yuan, Manzer, Zachary, Pinnock, Ferra, Singh, Rohit R.

Journal:

Biophysical Journal

Year:

2019

Language:

english

File:

PDF, 43 KB

english, 2019

6

The ribosomal exit tunnel as a target for optimizing protein expression in Escherichia coli

Lydia M. Contreras-Martinez, Jason T. Boock, Jan S. Kostecki, Prof. Matthew P. DeLisa

Journal:

Biotechnology Journal

Year:

2012

Language:

english

File:

PDF, 503 KB

english, 2012

7

Quorum signaling via AI-2 communicates the “Metabolic Burden” associated with heterologous protein production in Escherichia coli

Matthew P. DeLisa, James J. Valdes, William E. Bentley

Journal:

Biotechnology and Bioengineering

Year:

2001

Language:

english

File:

PDF, 381 KB

english, 2001

8

Protein translocation through a tunnel induces changes in folding kinetics: A lattice model study

Lydia M. Contreras Martínez, Francisco J. Martínez-Veracoechea, Prabhas Pohkarel, Abraham D. Stroock, Fernando A. Escobedo, Matthew P. DeLisa

Journal:

Biotechnology and Bioengineering

Year:

2006

Language:

english

File:

PDF, 680 KB

english, 2006

9

Engineering the spatial organization of metabolic enzymes: mimicking nature's synergy

Robert J Conrado, Jeffrey D Varner, Matthew P DeLisa

Journal:

Current Opinion in Biotechnology

Year:

2008

Language:

english

File:

PDF, 598 KB

english, 2008

10

Stochastic reaction–diffusion simulation of enzyme compartmentalization reveals improved catalytic efficiency for a synthetic metabolic pathway

Robert J. Conrado, Thomas J. Mansell, Jeffrey D. Varner, Matthew P. DeLisa

Journal:

Metabolic Engineering

Year:

2007

Language:

english

File:

PDF, 802 KB

english, 2007

11

Mining mammalian genomes for folding competent proteins using Tat-dependent genetic selection in Escherichia coli

Hyung-Kwon Lim, Thomas J. Mansell, Stephen W. Linderman, Adam C. Fisher, Michael R. Dyson, Matthew P. DeLisa

Journal:

Protein Science

Year:

2009

Language:

english

File:

PDF, 991 KB

english, 2009

12

Discovery of amyloid-beta aggregation inhibitors using an engineered assay for intracellular protein folding and solubility

Li Ling Lee, HyungHo Ha, Young-Tae Chang, Matthew P. DeLisa

Journal:

Protein Science

Year:

2009

Language:

english

File:

PDF, 492 KB

english, 2009

13

A rapid protein folding assay for the bacterial periplasm

Thomas J. Mansell, Stephen W. Linderman, Adam C. Fisher, Matthew P. DeLisa

Journal:

Protein Science

Year:

2010

Language:

english

File:

PDF, 425 KB

english, 2010

14

A filamentous phage display system for N-linked glycoproteins

Eda Çelik, Adam C. Fisher, Cassandra Guarino, Thomas J. Mansell, Matthew P. DeLisa

Journal:

Protein Science

Year:

2010

Language:

english

File:

PDF, 277 KB

english, 2010

15

Envelope stress is a trigger of CRISPR RNA-mediated DNA silencing in Escherichia coli

Ritsdeliz Perez-Rodriguez, Charles Haitjema, Qingqiu Huang, Ki Hyun Nam, Sarah Bernardis, Ailong Ke, Matthew P. DeLisa

Journal:

Molecular Microbiology

Year:

2011

Language:

english

File:

PDF, 955 KB

english, 2011

16

First International Conference on BiomolecularEngineering (ICBE)

Matthew DeLisa, Jason Haugh

Journal:

Biotechnology Progress

Year:

2008

Language:

english

File:

PDF, 11 KB

english, 2008

17

Synthetic metabolic pipelines

DeLisa, Matthew P, Conrado, Robert J

Journal:

Nature Biotechnology

Year:

2009

Language:

english

File:

PDF, 220 KB

english, 2009

18

Genetic selection for protein solubility enabled by the folding quality control feature of the twin-arginine translocation pathway

Adam C. Fisher, Woojin Kim, Matthew P. Delisa

Journal:

Protein Science

Year:

2006

Language:

english

File:

PDF, 618 KB

english, 2006

19

Exploration of twin-arginine translocation for expression and purification of correctly folded proteins in Escherichia coli

Adam C. Fisher, Jae-Young Kim, Ritsdeliz Perez-Rodriguez, Danielle Tullman-Ercek, Wallace R. Fish, Lee A. Henderson, Matthew P. DeLisa

Journal:

Microbial Biotechnology

Year:

2008

Language:

english

File:

PDF, 407 KB

english, 2008

20

An engineered eukaryotic protein glycosylation pathway in Escherichia coli

Valderrama-Rincon, Juan D, Fisher, Adam C, Merritt, Judith H, Fan, Yao-Yun, Reading, Craig A, Chhiba, Krishan, Heiss, Christian, Azadi, Parastoo, Aebi, Markus, DeLisa, Matthew P

Journal:

Nature Chemical Biology

Year:

2012

Language:

english

File:

PDF, 478 KB

english, 2012

21

Engineered Bacterial Outer Membrane Vesicles with Enhanced Functionality

Jae-Young Kim, Anne M. Doody, David J. Chen, Gina H. Cremona, Michael L. Shuler, David Putnam, Matthew P. DeLisa

Journal:

Journal of Molecular Biology

Year:

2008

Language:

english

File:

PDF, 1.63 MB

english, 2008

22

An Essential Role for the DnaK Molecular Chaperone in Stabilizing Over-expressed Substrate Proteins of the Bacterial Twin-arginine Translocation Pathway

Ritsdeliz Pérez-Rodríguez, Adam C. Fisher, Jason D. Perlmutter, Matthew G. Hicks, Angélique Chanal, Claire-Lise Santini, Long-Fei Wu, Tracy Palmer, Matthew P. DeLisa

Journal:

Journal of Molecular Biology

Year:

2007

Language:

english

File:

PDF, 1.05 MB

english, 2007

23

Intracellular Ribosome Display Via SecM Translation Arrest as a Selection for Antibodies with Enhanced Cytosolic Stability

Lydia M. Contreras-Martínez, Matthew P. DeLisa

Journal:

Journal of Molecular Biology

Year:

2007

Language:

english

File:

PDF, 951 KB

english, 2007

24

Efficient Isolation of Soluble Intracellular Single-chain Antibodies using the Twin-arginine Translocation Machinery

Adam C. Fisher, Matthew P. DeLisa

Journal:

Journal of Molecular Biology

Year:

2009

Language:

english

File:

PDF, 1.22 MB

english, 2009

25

Engineering Antibody Fitness and Function Using Membrane-Anchored Display of Correctly Folded Proteins

Amy J. Karlsson, Hyung-Kwon Lim, Hansen Xu, Mark A. Rocco, Matthew A. Bratkowski, Ailong Ke, Matthew P. DeLisa

Journal:

Journal of Molecular Biology

Year:

2012

Language:

english

File:

PDF, 607 KB

english, 2012

26

Dissecting the twin-arginine translocation pathway using genome-wide analysis

Philip Bronstein, Matthew Marrichi, Matthew P. DeLisa

Journal:

Research in Microbiology

Year:

2004

Language:

english

File:

PDF, 230 KB

english, 2004

27

Kinetics and Reaction Coordinates of the Reassembly of Protein Fragments Via Forward Flux Sampling

Borrero, Ernesto E., Contreras Martínez, Lydia M., DeLisa, Matthew P., Escobedo, Fernando A.

Journal:

Biophysical Journal

Year:

2010

Language:

english

File:

PDF, 1.53 MB

english, 2010

28

Cas5d Protein Processes Pre-crRNA and Assembles into a Cascade-like Interference Complex in Subtype I-C/Dvulg CRISPR-Cas System

Ki Hyun Nam, Charles Haitjema, Xueqi Liu, Fran Ding, Hongwei Wang, Matthew P. DeLisa, Ailong Ke

Journal:

Year:

2012

Language:

english

File:

PDF, 3.84 MB

english, 2012

29

Bacterial autoinduction: looking outside the cell for new metabolic engineering targets

Matthew P DeLisa, William E Bentley

Journal:

Microbial Cell Factories

Year:

2002

Language:

english

File:

PDF, 568 KB

english, 2002

30

In Silico Protein Fragmentation Reveals the Importance of Critical Nuclei on Domain Reassembly

Contreras Martínez, Lydia M., Borrero Quintana, Ernesto E., Escobedo, Fernando A., DeLisa, Matthew P.

Journal:

Biophysical Journal

Year:

2008

Language:

english

File:

PDF, 893 KB

english, 2008

31

Glycans-by-design: Engineering bacteria for the biosynthesis of complex glycans and glycoconjugates

Merritt, Judith H., Ollis, Anne A., Fisher, Adam C., DeLisa, Matthew P.

Journal:

Biotechnology and Bioengineering

Year:

2013

Language:

english

File:

PDF, 4.78 MB

english, 2013

32

Engineered genetic selection links in vivo protein folding and stability with asparagine-linked glycosylation

Mansell, Thomas J., Guarino, Cassandra, DeLisa, Matthew P.

Journal:

Biotechnology Journal

Year:

2013

Language:

english

File:

PDF, 460 KB

english, 2013

33

Pathogen-like particles: biomimetic vaccine carriers engineered at the nanoscale

Rosenthal, Joseph A., Chen, Linxiao, Baker, Jenny L., Putnam, David, DeLisa, Matthew P.

Journal:

Current Opinion in Biotechnology

Year:

2014

Language:

english

File:

PDF, 839 KB

english, 2014

34

Ubiquibodies, Synthetic E3 Ubiquitin Ligases Endowed with Unnatural Substrate Specificity for Targeted Protein Silencing

Portnoff, Alyse D., Stephens, Erin A., Varner, Jeffrey D., DeLisa, Matthew P.

Journal:

Journal of Biological Chemistry

Year:

2014

Language:

english

File:

PDF, 2.84 MB

english, 2014

35

Microbial biosynthesis of designer outer membrane vesicles

Baker, Jenny L, Chen, Linxiao, Rosenthal, Joseph A, Putnam, David, DeLisa, Matthew P

Journal:

Current Opinion in Biotechnology

Year:

2014

Language:

english

File:

PDF, 594 KB

english, 2014

36

The GlycoPhage display system and its applications

Çelik, Eda, DeLisa, Matthew P.

Journal:

New Biotechnology

Year:

2012

Language:

english

File:

PDF, 73 KB

english, 2012

37

Universal Genetic Assay for Engineering Extracellular Protein Expression

Haitjema, Charles H., Boock, Jason T., Natarajan, Aravind, Dominguez, Miguel A., Gardner, Jeffrey G., Keating, David H., Withers, Sydnor T., DeLisa, Matthew P.

Journal:

ACS Synthetic Biology

Year:

2014

Language:

english

File:

PDF, 2.33 MB

english, 2014

38

Engineered oligosaccharyltransferases with greatly relaxed acceptor-site specificity

Ollis, Anne A, Zhang, Sheng, Fisher, Adam C, DeLisa, Matthew P

Journal:

Nature Chemical Biology

Year:

2014

Language:

english

File:

PDF, 1.47 MB

english, 2014

39

Site-Specific Labeling of Surface Proteins on Living Cells Using Genetically Encoded Peptides that Bind Fluorescent Nanoparticle Probes

Rocco, Mark A., Kim, Jae-Young, Burns, Andrew, Kostecki, Jan, Doody, Anne, Wiesner, Ulrich, DeLisa, Matthew P.

Journal:

Bioconjugate Chemistry

Year:

2009

Language:

english

File:

PDF, 2.90 MB

english, 2009

40

Glycoarrays with engineered phages displaying structurally diverse oligosaccharides enable high-throughput detection of glycan-protein interactions

Çelik, Eda, Ollis, Anne A., Lasanajak, Yi, Fisher, Adam C., Gür, Göksu, Smith, David F., DeLisa, Matthew P.

Journal:

Biotechnology Journal

Year:

2015

Language:

english

File:

PDF, 772 KB

english, 2015

41

Split-Cre recombinase effectively monitors protein-protein interactions in living bacteria

O'Brien, Sean P., DeLisa, Matthew P.

Journal:

Biotechnology Journal

Year:

2014

Language:

english

File:

PDF, 643 KB

english, 2014

42

Repurposing a Bacterial Quality Control Mechanism to Enhance Enzyme Production in Living Cells

Boock, Jason T., King, Brian C., Taw, May N., Conrado, Robert J., Siu, Ka-Hei, Stark, Jessica C., Walker, Larry P., Gibson, Donna M., DeLisa, Matthew P.

Journal:

Journal of Molecular Biology

Year:

2015

Language:

english

File:

PDF, 1.18 MB

english, 2015

43

LOW-DOSE RECOMBINANT VACCINE ANTIGEN DELIVERY BY ENGINEERED OUTER MEMBRANE VESICLES

ROSENTHAL, JOSEPH, LEUNG, TIFFANY, DELISA, MATTHEW, PUTNAM, DAVID

Journal:

Year:

2013

Language:

english

File:

PDF, 631 KB

english, 2013

44

Making water-soluble integral membrane proteins in vivo using an amphipathic protein fusion strategy

Mizrachi, Dario, Chen, Yujie, Liu, Jiayan, Peng, Hwei-Ming, Ke, Ailong, Pollack, Lois, Turner, Raymond J., Auchus, Richard J., DeLisa, Matthew P.

Journal:

Nature Communications

Year:

2015

Language:

english

File:

PDF, 1.84 MB

english, 2015

45

A microbial sensor for discovering structural probes of protein misfolding and aggregation

Waraho-Zhmayev, Dujduan, Gkogka, Lizeta, Yu, Ta-Yi, DeLisa, Matthew P.

Journal:

Year:

2013

Language:

english

File:

PDF, 1.54 MB

english, 2013

46

Pair velocity correlations among swimming Escherichia coli bacteria are determined by force-quadrupole hydrodynamic interactions

Liao, Qian, Subramanian, Ganesh, DeLisa, Matthew P., Koch, Donald L., Wu, Mingming

Journal:

Physics of Fluids

Year:

2007

Language:

english

File:

PDF, 790 KB

english, 2007

47

Delivery of Foreign Antigens by Engineered Outer Membrane Vesicle Vaccines

David J. Chen, Nikolaus Osterrieder, Stephan M. Metzger, Elizabeth Buckled, Anne M. Dood, Matthew P. DeLisa, David Putnam and Robert Langer

Journal:

Proceedings of the National Academy of Sciences

Year:

2010

Language:

english

File:

PDF, 1.23 MB

english, 2010

48

Engineered Protein Machines: Emergent Tools for Synthetic Biology

Glasscock, Cameron J., Lucks, Julius B., DeLisa, Matthew P.

Journal:

Cell Chemical Biology

Year:

2016

Language:

english

File:

PDF, 1.28 MB

english, 2016

49

Recombinant M2e outer membrane vesicle vaccines protect against lethal influenza A challenge in BALB/c mice

Rappazzo, C. Garrett, Watkins, Hannah C., Guarino, Cassandra M., Chau, Annie, Lopez, Jody L., DeLisa, Matthew P., Leifer, Cynthia A., Whittaker, Gary R., Putnam, David

Journal:

Year:

2016

Language:

english

File:

PDF, 1.32 MB

english, 2016

50

Engineering the Protein Folding Landscape in Gram-Negative Bacteria

Mansell, Thomas, Fisher, Adam, DeLisa, Matthew

Journal:

Current Protein & Peptide Science

Year:

2008

Language:

english

File:

PDF, 311 KB

english, 2008

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